STRINGSTRING
Slin_6580 protein (Spirosoma linguale) - STRING interaction network
"Slin_6580" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6580Hypothetical protein (414 aa)    
Predicted Functional Partners:
Slin_5454
Hypothetical protein (792 aa)
   
          0.680
Slin_4644
Hypothetical protein (350 aa)
   
          0.667
Slin_1321
Hypothetical protein (736 aa)
   
          0.651
Slin_4772
Hypothetical protein (628 aa)
   
          0.645
Slin_5235
Hypothetical protein (425 aa)
   
          0.637
Slin_5638
Hypothetical protein (223 aa)
   
          0.596
Slin_5097
Hypothetical protein (727 aa)
   
          0.595
Slin_2543
Hypothetical protein (607 aa)
   
          0.563
Slin_2569
Hypothetical protein (373 aa)
   
          0.538
Slin_6582
LytTR family transcriptional regulator (250 aa)
              0.535
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (8%) [HD]