STRINGSTRING
Slin_6588 protein (Spirosoma linguale) - STRING interaction network
"Slin_6588" - Sodium solute transporter in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6588Sodium solute transporter (529 aa)    
Predicted Functional Partners:
Slin_6589
Dihydrodipicolinate synthetase (308 aa)
 
          0.946
Slin_2624
Kelch repeat-containing protein (372 aa)
          0.853
Slin_2625
Dihydrodipicolinate synthetase (315 aa)
 
   
  0.744
Slin_5730
Proline dehydrogenase (363 aa)
   
   
  0.738
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (298 aa)
   
   
  0.627
Slin_1479
Dihydrodipicolinate synthetase (304 aa)
   
   
  0.627
Slin_6587
Heparan-alpha-glucosaminide N-acetyltransferase (364 aa)
              0.604
Slin_5523
Delta-1-pyrroline-5-carboxylate dehydrogenase (543 aa)
   
   
  0.572
Slin_4408
Aldehyde dehydrogenase (457 aa)
   
   
  0.572
Slin_3069
Aldehyde dehydrogenase (508 aa)
   
   
  0.572
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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