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Slin_6615 protein (Spirosoma linguale) - STRING interaction network
"Slin_6615" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6615Hypothetical protein (356 aa)    
Predicted Functional Partners:
Slin_0693
Hypothetical protein (372 aa)
   
          0.610
Slin_6616
Aldo/keto reductase (328 aa)
              0.595
Slin_6416
Hypothetical protein (364 aa)
   
          0.580
Slin_5723
TetR family transcriptional regulator (177 aa)
   
          0.524
Slin_5291
Peptidase C1A papain (354 aa)
   
          0.499
Slin_5627
Anthranilate phosphoribosyltransferase-like protein (419 aa)
   
          0.484
Slin_6457
Hypothetical protein (143 aa)
   
          0.422
Slin_3380
ATPase AAA (632 aa)
   
          0.415
Slin_4611
Hypothetical protein (735 aa)
   
          0.413
Slin_0408
ADP-heptose--LPS heptosyltransferase-like protein (404 aa)
   
          0.400
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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