STRINGSTRING
Slin_6617 protein (Spirosoma linguale) - STRING interaction network
"Slin_6617" - Oxidoreductase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6617Oxidoreductase (341 aa)    
Predicted Functional Partners:
Slin_6618
Hypothetical protein (169 aa)
              0.655
Slin_2367
Peptidase M14, carboxypeptidase A (580 aa)
   
          0.624
Slin_1161
Hypothetical protein (831 aa)
 
        0.518
Slin_1372
Glycerophosphoryl diester phosphodiesterase (252 aa)
   
          0.499
Slin_0346
Peptidase M28 (308 aa)
   
          0.437
Slin_4465
Hypothetical protein (199 aa)
   
          0.431
Slin_1131
NAD-dependent epimerase/dehydratase (315 aa)
     
        0.428
Slin_5941
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (526 aa)
   
        0.427
Slin_5407
Nitrite reductase (NAD(P)H) small subunit (117 aa)
   
        0.427
Slin_6619
Hypothetical protein (266 aa)
              0.421
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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