STRINGSTRING
Slin_6619 protein (Spirosoma linguale) - STRING interaction network
"Slin_6619" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6619Hypothetical protein (266 aa)    
Predicted Functional Partners:
Slin_6620
Family 2 glycosyl transferase (508 aa)
              0.551
Slin_6618
Hypothetical protein (169 aa)
              0.533
Slin_2312
Hypothetical protein (526 aa)
   
          0.507
Slin_5164
TonB-dependent receptor (813 aa)
   
          0.505
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate (272 aa)
   
          0.496
panC
Pantoate/beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate (280 aa)
   
        0.490
Slin_3246
AIG2 family protein (122 aa)
   
          0.489
Slin_1582
TonB-dependent receptor plug (853 aa)
   
          0.454
Slin_2743
Phage shock protein C (847 aa)
   
          0.451
Slin_3485
UbiA prenyltransferase (291 aa)
 
          0.450
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (10%) [HD]