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Slin_6626 protein (Spirosoma linguale) - STRING interaction network
"Slin_6626" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6626Hypothetical protein (173 aa)    
Predicted Functional Partners:
Slin_6625
Hypothetical protein (183 aa)
              0.821
Slin_6624
Dihydroorotase (434 aa)
              0.821
Slin_1687
Hypothetical protein (751 aa)
   
          0.741
Slin_2001
Hypothetical protein (500 aa)
   
          0.729
Slin_5683
Hypothetical protein (330 aa)
   
          0.719
Slin_6627
Gliding motility-associated ABC transporter permease GldF (240 aa)
              0.709
Slin_1217
Hypothetical protein (700 aa)
   
          0.676
Slin_4634
Hypothetical protein (288 aa)
   
          0.673
Slin_1321
Hypothetical protein (736 aa)
   
          0.643
Slin_2423
Double-stranded RNA/RNA-DNA hybrid binding protein-like protein (212 aa)
   
          0.636
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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