STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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[Homology]
Score
menBNaphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. (279 aa)    
Predicted Functional Partners:
GAL90755.1
O-succinylbenzoic acid-CoA ligase.
 
  
 0.989
GAL88658.1
ComA operon protein 2.
 
  
 0.961
GAL90761.1
1,4-dihydroxy-2-naphthoate polyprenyltransferase.
 
   
 0.959
GAL88656.1
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase.
  
 0.865
GAL90757.1
O-succinylbenzoate synthase.
 
   
 0.811
GAL88657.1
Isochorismate synthase.
 
   
 0.734
GAL88606.1
DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
 
    
 0.727
GAL89242.1
3-hydroxybutyryl-CoA dehydrogenase.
      0.677
GAL90760.1
Metal-dependent hydrolase.
       0.618
GAL90108.1
Glycolate dehydrogenase subunit GlcD.
 
    
 0.543
Your Current Organism:
Jejuia pallidilutea
NCBI taxonomy Id: 504487
Other names: DSM 21165, Gaetbulibacter sp. EM39, J. pallidilutea, Jejuia pallidilutea Lee et al. 2009 emend. Park et al 2013, KCTC 22298, strain EM39
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