STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK05305.1DNA polymerase beta domain-containing protein; COG1669 Predicted nucleotidyltransferases. (91 aa)    
Predicted Functional Partners:
AGK05304.1
Hypothetical protein.
 
    0.950
AGK05097.1
Hypothetical protein.
 
    0.795
AGK04472.1
Hypothetical protein.
 
    0.793
AGK05303.1
Peptidase M23; COG0739 Membrane proteins related to metalloendopeptidases.
       0.726
AGK05306.1
ATP/cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
       0.546
AGK05307.1
Periplasmic binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
       0.529
AGK05308.1
Hypothetical protein.
       0.529
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.