STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI63986.1Phosphotransferase enzyme family protein. (315 aa)    
Predicted Functional Partners:
SDI17761.1
Protein of unknown function.
  
     0.713
SDI63964.1
Adenylate cyclase.
       0.642
SDI63878.1
Hypothetical protein.
       0.602
SDH82338.1
Hypothetical protein.
  
     0.581
SDI64002.1
Hypothetical protein.
       0.576
SDI19565.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.481
SDJ11833.1
3',5'-cyclic AMP phosphodiesterase CpdA.
  
     0.472
SDJ34426.1
Hypothetical protein.
  
     0.456
SDH83652.1
Pyridine nucleotide-disulphide oxidoreductase.
  
     0.451
SDI63860.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
       0.434
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.