STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI72470.1PPOX class probable F420-dependent enzyme. (158 aa)    
Predicted Functional Partners:
SDJ23084.1
CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
    0.633
SDI72451.1
stearoyl-CoA desaturase (delta-9 desaturase).
       0.618
SDH93970.1
Hypothetical protein.
   
    0.555
SDI22732.1
F420-dependent oxidoreductase, G6PDH family.
  
     0.552
SDI09176.1
Hypothetical protein.
   
    0.495
SDH53610.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
     0.471
arcA
Arginine deiminase.
   
    0.457
SDI21226.1
ANTAR domain-containing protein.
 
     0.435
SDI05121.1
PPOX class probable F420-dependent enzyme.
  
     0.430
SDI15324.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
     0.413
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.