STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH69107.1Fibronectin type III domain-containing protein. (666 aa)    
Predicted Functional Partners:
SDG59236.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.851
SDG18177.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  0.752
SDH69078.1
Hypothetical protein.
       0.741
SDH68994.1
Hypothetical protein.
 
 
   0.691
SDH69133.1
Chitodextrinase.
 
    
0.678
SDH69053.1
Hypothetical protein.
       0.673
SDH96487.1
Chitinase, GH18 family.
 
 
  0.672
SDG59185.1
Chitinase.
 
 
 0.653
SDG35456.1
Chitinase.
 
 
  0.650
SDG59155.1
Chitinase.
 
 
  0.642
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.