node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEI05093.1 | AEI05889.1 | OCA5_c03670 | OCA5_c11710 | Hypothetical protein. | Putative ATP-dependent DNA ligase. | 0.746 |
AEI05093.1 | dnaN | OCA5_c03670 | OCA5_c00020 | Hypothetical protein. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.712 |
AEI05093.1 | polA | OCA5_c03670 | OCA5_c05750 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.989 |
AEI05093.1 | rpoA | OCA5_c03670 | OCA5_c23060 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
AEI05889.1 | AEI05093.1 | OCA5_c11710 | OCA5_c03670 | Putative ATP-dependent DNA ligase. | Hypothetical protein. | 0.746 |
AEI05889.1 | AEI07490.1 | OCA5_c11710 | OCA5_c27970 | Putative ATP-dependent DNA ligase. | Putative cleavage and polyadenylation specificity factor. | 0.830 |
AEI05889.1 | dnaN | OCA5_c11710 | OCA5_c00020 | Putative ATP-dependent DNA ligase. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.987 |
AEI05889.1 | gmhB | OCA5_c11710 | OCA5_c26450 | Putative ATP-dependent DNA ligase. | D,D-heptose 1,7-bisphosphate phosphatase GmhB. | 0.824 |
AEI05889.1 | ku | OCA5_c11710 | OCA5_c13510 | Putative ATP-dependent DNA ligase. | DNA helicase, ATP-dependent, Ku type; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.954 |
AEI05889.1 | ligA | OCA5_c11710 | OCA5_c27150 | Putative ATP-dependent DNA ligase. | DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.795 |
AEI05889.1 | polA | OCA5_c11710 | OCA5_c05750 | Putative ATP-dependent DNA ligase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.982 |
AEI05889.1 | rpoA | OCA5_c11710 | OCA5_c23060 | Putative ATP-dependent DNA ligase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.749 |
AEI05889.1 | xthA1 | OCA5_c11710 | OCA5_c01720 | Putative ATP-dependent DNA ligase. | Exodeoxyribonuclease III. | 0.800 |
AEI05889.1 | xthA2 | OCA5_c11710 | OCA5_c17560 | Putative ATP-dependent DNA ligase. | Exodeoxyribonuclease III. | 0.800 |
AEI07490.1 | AEI05889.1 | OCA5_c27970 | OCA5_c11710 | Putative cleavage and polyadenylation specificity factor. | Putative ATP-dependent DNA ligase. | 0.830 |
AEI07490.1 | ligA | OCA5_c27970 | OCA5_c27150 | Putative cleavage and polyadenylation specificity factor. | DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.636 |
AEI07490.1 | polA | OCA5_c27970 | OCA5_c05750 | Putative cleavage and polyadenylation specificity factor. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.880 |
AEI07490.1 | rpoA | OCA5_c27970 | OCA5_c23060 | Putative cleavage and polyadenylation specificity factor. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.850 |
dnaN | AEI05093.1 | OCA5_c00020 | OCA5_c03670 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein. | 0.712 |
dnaN | AEI05889.1 | OCA5_c00020 | OCA5_c11710 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Putative ATP-dependent DNA ligase. | 0.987 |