Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEI06867.1 | ate | OCA5_c21640 | OCA5_c21650 | RDD domain protein. | arginyl-tRNA--protein transferase Ate; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.594 |
AEI06867.1 | hemB | OCA5_c21640 | OCA5_c21630 | RDD domain protein. | Delta-aminolevulinic acid dehydratase HemB; Belongs to the ALAD family. | 0.569 |
AEI06869.1 | ate | OCA5_c21660 | OCA5_c21650 | Hypothetical protein. | arginyl-tRNA--protein transferase Ate; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.471 |
AEI06941.1 | ate | OCA5_c22390 | OCA5_c21650 | Hypothetical protein. | arginyl-tRNA--protein transferase Ate; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.576 |
ate | AEI06867.1 | OCA5_c21650 | OCA5_c21640 | arginyl-tRNA--protein transferase Ate; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | RDD domain protein. | 0.594 |
ate | AEI06869.1 | OCA5_c21650 | OCA5_c21660 | arginyl-tRNA--protein transferase Ate; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Hypothetical protein. | 0.471 |
ate | AEI06941.1 | OCA5_c21650 | OCA5_c22390 | arginyl-tRNA--protein transferase Ate; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Hypothetical protein. | 0.576 |
ate | clpS | OCA5_c21650 | OCA5_c22430 | arginyl-tRNA--protein transferase Ate; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | clpS, ATP-dependent Clp protease adaptor; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.457 |
ate | hemB | OCA5_c21650 | OCA5_c21630 | arginyl-tRNA--protein transferase Ate; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Delta-aminolevulinic acid dehydratase HemB; Belongs to the ALAD family. | 0.443 |
clpS | ate | OCA5_c22430 | OCA5_c21650 | clpS, ATP-dependent Clp protease adaptor; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | arginyl-tRNA--protein transferase Ate; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.457 |
hemB | AEI06867.1 | OCA5_c21630 | OCA5_c21640 | Delta-aminolevulinic acid dehydratase HemB; Belongs to the ALAD family. | RDD domain protein. | 0.569 |
hemB | ate | OCA5_c21630 | OCA5_c21650 | Delta-aminolevulinic acid dehydratase HemB; Belongs to the ALAD family. | arginyl-tRNA--protein transferase Ate; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.443 |