STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_2514TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; YHS domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: pzu:PHZ_c1472 copper-translocating P-type ATPase; SMART: TRASH domain protein. (782 aa)    
Predicted Functional Partners:
Cseg_2515
PFAM: copper resistance protein CopC; KEGG: pzu:PHZ_p0225 copper resistance protein C precursor.
     
 0.781
Cseg_2520
Copper-resistance protein, CopA family; KEGG: pzu:PHZ_c1476 copper-binding protein; TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2.
 
  
 0.770
Cseg_3327
TIGRFAM: copper-resistance protein, CopA family; KEGG: ccs:CCNA_01015 multicopper oxidase PcoA; PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2.
 
  
 0.767
Cseg_3038
TIGRFAM: nitrite reductase, copper-containing; KEGG: pzu:PHZ_c0614 multicopper oxidase; PFAM: multicopper oxidase type 3; Belongs to the multicopper oxidase family.
  
 0.763
Cseg_2513
Heavy metal efflux pump, CzcA family; KEGG: pzu:PHZ_c1433 cation efflux system membrane protein A; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.693
Cseg_2516
PFAM: copper resistance D domain protein; KEGG: pzu:PHZ_c1480 putative copper export protein.
     
 0.652
Cseg_0059
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: ccs:CCNA_00066 Rieske (2Fe-2S) domain protein.
   
   0.645
Cseg_1159
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: ccs:CCNA_02613 Rieske (2Fe-2S) domain protein.
   
   0.645
Cseg_2057
KEGG: cak:Caul_2955 nitrite reductase (NAD(P)H), small subunit; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain.
   
   0.645
Cseg_2511
PFAM: outer membrane efflux protein; KEGG: pzu:PHZ_p0238 metal ion efflux outer membrane factor protein family protein.
 
  
 0.628
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.