STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPDQ_001964Uncharacterized protein. (513 aa)    
Predicted Functional Partners:
MPDQ_005307
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.990
MPDQ_004693
Uncharacterized protein.
    
   0.850
MPDQ_004708
DUF2439 domain-containing protein.
    
 0.807
MPDQ_000314
Uncharacterized protein.
    
  0.719
MPDQ_000670
LsmAD domain-containing protein.
   
 
 0.716
MEX67
Nuclear mRNA export, poly(A)+RNA binding protein.
    
  0.716
EB1
Microtubule-associated protein RP/EB member 1.
 
  
 
 0.702
CPC2
Cross-pathway control WD-repeat protein cpc2.
   
 
 0.689
CDC48
AAA ATPase cdc48; Belongs to the AAA ATPase family.
   
 
 0.629
PUF3_1
mRNA binding protein puf3.
   
 
 0.620
Your Current Organism:
Monascus purpureus
NCBI taxonomy Id: 5098
Other names: ATCC 16361 [[Monascus araneosus]], ATCC 16365, ATCC 16367 [[Monascus rubiginosus]], ATCC 16426, CBS 109.07, CBS 284.34 [[Monascus araneosus]], CBS 288.34 [[Monascus rubiginosus]], CECT 2955, FRR 2190 [[Monascus araneosus]], IFO 4482 [[Monascus araneosus]], IFO 4484 [[Monascus rubiginosus]], IFO 4513, IMI 210765, M. purpureus, Monascus albidus, Monascus anka, Monascus araneosus, Monascus purpurea, Monascus rubiginosus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.