STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NECAME_15678Dihydrouridine synthase. (352 aa)    
Predicted Functional Partners:
NECAME_14494
Probable ribosome biogenesis protein NECAME_14494; Probable pre-rRNA processing protein involved in ribosome biogenesis.
   
  
 0.651
NECAME_08109
UPF0020 domain-containing protein.
   
  
 0.610
NECAME_13193
tRNA methyltransferase complex GCD14 subunit.
   
  
 0.602
NECAME_05607
tRNA (Guanine-N(1)-)-methyltransferase.
   
  
 0.573
NECAME_15631
DTW domain protein.
      
 0.553
NECAME_19551
Uncharacterized protein.
      
 0.553
NECAME_04626
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
     
 0.511
NECAME_15331
DUF2428 domain-containing protein.
   
  
 0.488
NECAME_09547
B-cell receptor-associated protein 31-like protein.
      
 0.487
NECAME_15619
Uncharacterized protein.
   
 
 0.476
Your Current Organism:
Necator americanus
NCBI taxonomy Id: 51031
Other names: N. americanus
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