STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amdRAcetamidase regulatory protein; Positively regulates the expression of genes involved in the catabolism of certain amides, omega amino acids, and lactams. (775 aa)    
Predicted Functional Partners:
amdS
Acetamidase; Allows acetamide to be used as a sole carbon or nitrogen source.
      
 0.905
AO090005001160
Uncharacterized protein.
      
 0.756
AO090701000206
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
      
 0.753
AO090003000129
Amidase domain-containing protein.
      
 0.615
AO090009000548
Uncharacterized protein.
      
 0.596
AO090701000521
Uncharacterized protein.
      
 0.414
Your Current Organism:
Aspergillus oryzae
NCBI taxonomy Id: 510516
Other names: A. oryzae RIB40, Aspergillus oryzae RIB40
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