STRINGSTRING
JT27_00010 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_00010" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_00010Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (446 aa)    
Predicted Functional Partners:
JT27_19015
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (727 aa)
   
  0.930
JT27_19010
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method- Protein Homology (401 aa)
 
  0.894
JT27_05945
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (729 aa)
   
  0.825
JT27_05950
Secretion protein HylD; Derived by automated computational analysis using gene prediction method- Protein Homology (453 aa)
 
  0.820
JT27_05960
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1342 aa)
 
   
  0.782
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (652 aa)
   
 
  0.565
JT27_19815
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (101 aa)
   
 
  0.471
JT27_05965
Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology (210 aa)
 
          0.458
JT27_05970
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (646 aa)
 
 
 
  0.457
JT27_05400
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (377 aa)
   
 
  0.406
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (8%) [HD]