STRINGSTRING
AFA_08795 protein (Alcaligenes faecalis) - STRING interaction network
"AFA_08795" - Iron-sulfur cluster assembly scaffold protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFA_08795Iron-sulfur cluster assembly scaffold protein; Derived by automated computational analysis using gene prediction method- Protein Homology (150 aa)    
Predicted Functional Partners:
JT27_00040
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family (415 aa)
 
  0.996
JT27_00045
Fe-S cluster assembly protein SufD; Derived by automated computational analysis using gene prediction method- Protein Homology (435 aa)
 
   
  0.954
sufC
Fe-S cluster assembly ATPase SufC; Part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
 
   
  0.944
JT27_00055
Fe-S cluster assembly protein SufB; Derived by automated computational analysis using gene prediction method- Protein Homology (482 aa)
 
   
  0.926
iscS
Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily (397 aa)
 
 
  0.916
JT27_00030
FeS assembly SUF system protein SufT; Derived by automated computational analysis using gene prediction method- Protein Homology (186 aa)
 
   
  0.908
iscR
Fe-S cluster assembly transcriptional regulator IscR; Derived by automated computational analysis using gene prediction method- Protein Homology (158 aa)
 
   
  0.741
JT27_01890
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (192 aa)
   
 
  0.623
dnaK
Chaperone protein DnaK; Acts as a chaperone (641 aa)
   
 
  0.565
JT27_00820
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (203 aa)
   
 
  0.506
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (8%) [HD]