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JT27_00120 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_00120" - Among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade in Alcaligenes faecalis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
JT27_00120Among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade; unknown function; Derived by automated computational analysis using gene prediction method- Protein Homology (507 aa)    
Predicted Functional Partners:
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (172 aa)
          0.861
JT27_03080
DNA processing protein DprA; Derived by automated computational analysis using gene prediction method- Protein Homology (375 aa)
 
  0.765
JT27_07780
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (190 aa)
 
   
  0.675
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group (181 aa)
 
     
  0.643
JT27_00135
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (95 aa)
              0.623
JT27_00125
Pentapeptide repeat protein; Derived by automated computational analysis using gene prediction method- Protein Homology (225 aa)
              0.563
JT27_07870
UPF0102 protein JT27_07870; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0102 family (152 aa)
 
        0.521
nnrD
Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family (494 aa)
 
          0.500
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (905 aa)
 
          0.473
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily (689 aa)
         
  0.437
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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