STRINGSTRING
JT27_00470 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_00470" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_00470Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1106 aa)    
Predicted Functional Partners:
JT27_02180
Tail protein; Derived by automated computational analysis using gene prediction method- Protein Homology (247 aa)
 
        0.850
JT27_02175
Hydrolase Nlp/P60; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
 
   
  0.846
JT27_00475
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (100 aa)
              0.845
JT27_02170
Phage tail assembly protein; Derived by automated computational analysis using gene prediction method- Protein Homology (195 aa)
 
        0.830
JT27_02185
Phage minor tail protein; Derived by automated computational analysis using gene prediction method- Protein Homology (112 aa)
 
        0.825
JT27_15730
Portal protein; Derived by automated computational analysis using gene prediction method- Protein Homology (432 aa)
 
          0.806
JT27_00505
Elements of external origin; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)
 
          0.771
JT27_15755
Head-tail adaptor protein; Derived by automated computational analysis using gene prediction method- Protein Homology (112 aa)
 
          0.769
JT27_15725
Terminase; Derived by automated computational analysis using gene prediction method- Protein Homology (554 aa)
 
          0.759
JT27_15740
Head protein; Derived by automated computational analysis using gene prediction method- Protein Homology (401 aa)
 
          0.756
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (9%) [HD]