STRINGSTRING
JT27_01015 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_01015" - Uncharacterized protein in Alcaligenes faecalis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_01015Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (495 aa)    
Predicted Functional Partners:
JT27_01010
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)
 
          0.898
JT27_01005
Receptor; Derived by automated computational analysis using gene prediction method- Protein Homology (1055 aa)
 
          0.873
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (486 aa)
         
  0.568
JT27_17070
Thioredoxin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (311 aa)
   
 
  0.490
JT27_14950
Thioredoxin reductase; Catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (318 aa)
   
 
  0.490
JT27_06580
RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily (179 aa)
   
     
  0.470
JT27_01550
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family (163 aa)
   
 
  0.466
JT27_08120
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily (170 aa)
   
     
  0.461
JT27_04110
RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily (164 aa)
   
     
  0.460
groEL
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (548 aa)
   
 
  0.454
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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