STRINGSTRING
JT27_01165 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_01165" - Membrane protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_01165Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (153 aa)    
Predicted Functional Partners:
JT27_01170
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (506 aa)
 
          0.922
JT27_05055
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (325 aa)
   
          0.714
JT27_08410
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)
   
          0.695
JT27_18775
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)
   
          0.681
JT27_20210
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (323 aa)
   
          0.670
JT27_10550
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (331 aa)
   
          0.661
JT27_04035
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (322 aa)
   
          0.642
JT27_20000
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (324 aa)
   
          0.611
JT27_07790
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)
   
          0.602
JT27_10020
MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (311 aa)
   
          0.584
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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