STRINGSTRING
JT27_01385 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_01385" - Integrase in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
JT27_01385Integrase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ’phage’ integrase family (400 aa)    
Predicted Functional Partners:
JT27_01365
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (71 aa)
 
     
  0.789
JT27_13170
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (577 aa)
 
   
  0.508
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (528 aa)
   
   
  0.496
JT27_05565
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (400 aa)
   
        0.480
JT27_13085
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (232 aa)
   
        0.476
JT27_12985
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (60 aa)
 
   
  0.467
JT27_13055
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (371 aa)
 
   
  0.445
JT27_13040
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (208 aa)
   
          0.438
JT27_12925
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (542 aa)
   
        0.430
JT27_12915
Integrating conjugative element protein; Derived by automated computational analysis using gene prediction method- Protein Homology (463 aa)
   
          0.421
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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