STRINGSTRING
JT27_01845 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_01845" - Paraquat-inducible protein B in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_01845Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method- Protein Homology (550 aa)    
Predicted Functional Partners:
JT27_01850
Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method- Protein Homology (429 aa)
   
  0.993
JT27_01840
Lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology (204 aa)
 
   
  0.988
clpA
Clp protease ClpX; ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ClpA/ClpB family (773 aa)
              0.843
JT27_05960
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1342 aa)
         
  0.732
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1257 aa)
              0.656
clpS
ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (107 aa)
              0.585
JT27_06975
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (223 aa)
   
 
  0.551
JT27_06990
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
   
 
  0.440
JT27_03305
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (378 aa)
   
 
  0.440
AFA_07410
Cold-shock protein; Derived by automated computational analysis using gene prediction method- Protein Homology (81 aa)
   
        0.423
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (11%) [HD]