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AFA_07410 protein (Alcaligenes faecalis) - STRING interaction network
"AFA_07410" - Cold-shock protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFA_07410Cold-shock protein; Derived by automated computational analysis using gene prediction method- Protein Homology (81 aa)    
Predicted Functional Partners:
JT27_01870
Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (156 aa)
              0.703
clpS
ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (107 aa)
         
  0.595
clpA
Clp protease ClpX; ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ClpA/ClpB family (773 aa)
   
 
  0.523
JT27_01845
Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method- Protein Homology (550 aa)
   
        0.423
JT27_01850
Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method- Protein Homology (429 aa)
              0.403
JT27_01840
Lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology (204 aa)
              0.402
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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