STRINGSTRING
JT27_02905 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_02905" - Sterol-binding protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_02905Sterol-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (165 aa)    
Predicted Functional Partners:
JT27_02910
Protease; Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
 
 
  0.979
JT27_02915
Protease; Derived by automated computational analysis using gene prediction method- Protein Homology (331 aa)
 
 
  0.976
JT27_02925
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (455 aa)
 
          0.736
JT27_02920
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (73 aa)
 
          0.665
JT27_02900
Radical SAM protein; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)
 
          0.564
JT27_02890
Ribonucleoside-triphosphate reductase; Catalyzes the reduction of nucleoside 5’-triphosphates to 2’-deoxynucleoside 5’-triphosphates; Derived by automated computational analysis using gene prediction method- Protein Homology (616 aa)
 
        0.526
JT27_02895
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (60 aa)
 
          0.517
JT27_04065
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (169 aa)
   
      0.499
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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