STRINGSTRING
JT27_02925 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_02925" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_02925Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (455 aa)    
Predicted Functional Partners:
JT27_02920
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (73 aa)
 
          0.963
JT27_02905
Sterol-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (165 aa)
 
          0.736
JT27_02910
Protease; Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
 
          0.702
JT27_02915
Protease; Derived by automated computational analysis using gene prediction method- Protein Homology (331 aa)
 
          0.632
JT27_02930
Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (236 aa)
 
     
  0.513
JT27_03565
Invasion gene expression up-regulator SirB; Derived by automated computational analysis using gene prediction method- Protein Homology (126 aa)
 
          0.465
JT27_09615
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (405 aa)
   
          0.448
JT27_06545
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (386 aa)
   
 
  0.447
JT27_15605
Cytochrome c class I NirC; Derived by automated computational analysis using gene prediction method- Protein Homology (107 aa)
 
 
  0.444
JT27_11895
Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (196 aa)
 
   
  0.428
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (11%) [HD]