STRINGSTRING
JT27_02990 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_02990" - Cytochrome C550 in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_02990Cytochrome C550; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S11 family (409 aa)    
Predicted Functional Partners:
JT27_11235
Peptidase M15; Derived by automated computational analysis using gene prediction method- Protein Homology (473 aa)
       
  0.882
mrdA
Peptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall (619 aa)
 
 
  0.879
JT27_06125
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (815 aa)
         
  0.867
JT27_02980
UPF0250 protein JT27_02980; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0250 family (90 aa)
   
        0.860
JT27_02985
Cytochrome C550; Derived by automated computational analysis using gene prediction method- Protein Homology (290 aa)
              0.855
lipB
Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate (220 aa)
   
        0.833
mrdB
Peptidoglycan glycosyltransferase MrdB; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily (380 aa)
   
 
  0.808
JT27_02995
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (216 aa)
 
          0.766
murE
Multifunctional fusion protein; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan; Belongs to the MurCDEF family. MurE subfamily (925 aa)
 
   
  0.760
JT27_11280
PhoH-like protein; Derived by automated computational analysis using gene prediction method- Protein Homology (331 aa)
            0.717
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (10%) [HD]