STRINGSTRING
JT27_03035 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_03035" - Putative hydro-lyase JT27_03035 in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_03035Putative hydro-lyase JT27_03035; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the D-glutamate cyclase family (267 aa)    
Predicted Functional Partners:
JT27_08000
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (232 aa)
        0.864
JT27_07995
Carboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (337 aa)
        0.838
JT27_15330
UPF0271 protein JT27_15330; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0271 (lamB) family (252 aa)
 
        0.791
JT27_03030
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (299 aa)
 
          0.706
JT27_03040
Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (348 aa)
 
          0.676
JT27_04615
3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (670 aa)
 
        0.608
JT27_03055
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (227 aa)
 
          0.593
JT27_03045
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (206 aa)
 
          0.562
JT27_03050
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (427 aa)
              0.415
JT27_03025
Heptosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (333 aa)
              0.413
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (10%) [HD]