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JT27_03165 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_03165" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_03165Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (237 aa)    
Predicted Functional Partners:
JT27_03170
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (226 aa)
 
0.983
JT27_03160
Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (269 aa)
 
  0.974
JT27_03155
Amino acid transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
 
  0.932
JT27_09245
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 3 family (264 aa)
 
  0.909
JT27_04880
Amino acid transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
 
  0.853
glnH
Glutamine ABC transporter substrate-bindnig protein; Similar to periplasmic-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 3 family (252 aa)
 
  0.833
JT27_02525
Polar amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (312 aa)
 
  0.791
JT27_15875
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 3 family (270 aa)
 
  0.782
JT27_15860
Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (241 aa)
 
  0.779
JT27_08405
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (245 aa)
 
  0.779
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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