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JT27_03275 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_03275" - ABC transporter substrate-binding protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_03275ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (324 aa)    
Predicted Functional Partners:
JT27_03265
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (440 aa)
 
          0.892
JT27_03270
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (174 aa)
 
   
  0.780
JT27_10520
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (439 aa)
   
          0.739
JT27_04135
C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (440 aa)
   
          0.734
JT27_06815
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (430 aa)
 
   
  0.711
JT27_05300
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (429 aa)
 
   
  0.708
JT27_04930
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (429 aa)
 
   
  0.682
JT27_03050
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (427 aa)
 
   
  0.656
JT27_03445
Permease; Derived by automated computational analysis using gene prediction method- Protein Homology (429 aa)
 
   
  0.638
JT27_03315
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (431 aa)
 
   
  0.618
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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