STRINGSTRING
JT27_03880 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_03880" - Flagellar assembly protein FliT in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_03880Flagellar assembly protein FliT; Derived by automated computational analysis using gene prediction method- Protein Homology (111 aa)    
Predicted Functional Partners:
JT27_03875
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (429 aa)
 
     
  0.927
JT27_03870
Flagellar biosynthesis protein FlhB; Derived by automated computational analysis using gene prediction method- Protein Homology (106 aa)
              0.880
JT27_03885
Flagellar protein FliS; Derived by automated computational analysis using gene prediction method- Protein Homology (143 aa)
 
     
  0.822
JT27_03895
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (133 aa)
 
          0.782
JT27_11215
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
   
          0.769
JT27_16305
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (165 aa)
   
          0.752
JT27_03890
Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end (464 aa)
         
  0.732
JT27_11225
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
   
          0.722
JT27_14110
General secretion pathway protein GspN; Derived by automated computational analysis using gene prediction method- Protein Homology (248 aa)
   
          0.669
JT27_20235
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (195 aa)
   
          0.668
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (10%) [HD]