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JT27_04195 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_04195" - Iron transporter in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_04195Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (98 aa)    
Predicted Functional Partners:
JT27_04200
Peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology (545 aa)
 
          0.972
JT27_08130
Ligand-gated channel; Derived by automated computational analysis using gene prediction method- Protein Homology (796 aa)
 
          0.581
JT27_09555
Ferric-pseudobactin 358 receptor; Derived by automated computational analysis using gene prediction method- Protein Homology (814 aa)
 
          0.567
JT27_17705
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (799 aa)
 
          0.554
JT27_06590
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (844 aa)
 
          0.553
JT27_12375
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method- Protein Homology (811 aa)
 
          0.547
JT27_04865
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (828 aa)
 
          0.534
JT27_07480
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (784 aa)
 
          0.532
JT27_14610
Porin; Derived by automated computational analysis using gene prediction method- Protein Homology (732 aa)
 
          0.527
JT27_06160
TonB-dependent outer membrane receptor; Derived by automated computational analysis using gene prediction method- Protein Homology (792 aa)
 
          0.527
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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