STRINGSTRING
JT27_04220 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_04220" - Derived by automated computational analysis using gene prediction method: Protein Homology in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_04220Derived by automated computational analysis using gene prediction method- Protein Homology (431 aa)    
Predicted Functional Partners:
JT27_04225
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (119 aa)
 
 
 
  0.982
JT27_04230
Sulfur oxidation protein SoxZ; Derived by automated computational analysis using gene prediction method- Protein Homology (108 aa)
 
     
  0.895
JT27_04215
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (334 aa)
 
     
  0.889
JT27_04235
Sulfur oxidation protein SoxY; Derived by automated computational analysis using gene prediction method- Protein Homology (167 aa)
 
     
  0.882
JT27_04240
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (442 aa)
 
       
0.626
JT27_04210
Hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (160 aa)
   
        0.520
JT27_15570
Derived by automated computational analysis using gene prediction method- Protein Homology (107 aa)
 
 
 
  0.506
JT27_06100
Derived by automated computational analysis using gene prediction method- Protein Homology (219 aa)
 
 
 
  0.501
JT27_04270
Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
 
 
 
  0.494
AFA_15730
Rubredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (54 aa)
   
 
  0.464
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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