STRINGSTRING
JT27_04320 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_04320" - AraC family transcriptional regulator in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_04320AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (316 aa)    
Predicted Functional Partners:
JT27_04315
Derived by automated computational analysis using gene prediction method- Protein Homology (166 aa)
 
          0.628
JT27_02370
DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (328 aa)
   
          0.575
JT27_04325
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (267 aa)
   
        0.562
JT27_06075
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (324 aa)
   
          0.561
JT27_08835
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
 
 
 
  0.526
aauB
Aralkylamine dehydrogenase heavy chain; Oxidizes primary aromatic amines and, more slowly, some long-chain aliphatic amines, but not methylamine or ethylamine. Uses azurin as an electron acceptor to transfer electrons from the reduced tryptophylquinone cofactor (390 aa)
 
        0.520
JT27_04305
Thiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (213 aa)
 
          0.511
aauA
Aralkylamine dehydrogenase light chain; Oxidizes primary aromatic amines and, more slowly, some long-chain aliphatic amines, but not methylamine or ethylamine. Uses azurin as an electron acceptor to transfer electrons from the reduced tryptophylquinone cofactor (182 aa)
 
          0.494
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (358 aa)
         
  0.487
JT27_04300
Methylamine utilization protein MauE; Derived by automated computational analysis using gene prediction method- Protein Homology (180 aa)
 
          0.486
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (11%) [HD]