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JT27_04325 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_04325" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_04325Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (267 aa)    
Predicted Functional Partners:
JT27_17695
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (420 aa)
   
          0.784
AFA_03375
Barstar family protein 2; Derived by automated computational analysis using gene prediction method- Protein Homology (155 aa)
   
          0.784
JT27_10720
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)
   
          0.782
JT27_11685
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (273 aa)
   
          0.775
JT27_08740
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)
   
          0.775
JT27_08950
Heptosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (301 aa)
   
          0.772
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (358 aa)
         
  0.770
JT27_04470
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (170 aa)
   
          0.770
JT27_11940
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1352 aa)
   
          0.767
JT27_11785
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (453 aa)
 
          0.766
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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