STRINGSTRING
JT27_04545 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_04545" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_04545Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)    
Predicted Functional Partners:
JT27_04550
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (106 aa)
              0.526
JT27_06600
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (116 aa)
   
          0.481
JT27_00225
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (246 aa)
   
          0.469
JT27_05400
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (377 aa)
   
          0.464
JT27_12955
Zinc metalloprotease; Derived by automated computational analysis using gene prediction method- Protein Homology (268 aa)
   
          0.462
JT27_05360
ATP synthase subunit alpha; Derived by automated computational analysis using gene prediction method- Protein Homology (353 aa)
   
          0.450
JT27_05375
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (119 aa)
   
          0.420
JT27_05370
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (130 aa)
   
          0.417
JT27_08905
Porin; Derived by automated computational analysis using gene prediction method- Protein Homology (333 aa)
   
          0.405
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (27%) [HD]