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smg protein (Alcaligenes faecalis) - STRING interaction network
"smg" - Protein Smg homolog in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smgProtein Smg homolog; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the Smg family (152 aa)    
Predicted Functional Partners:
gluQ
Glutamyl-Q tRNA(Asp) synthetase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon (302 aa)
 
          0.690
zapD
Cell division protein ZapD; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity (251 aa)
   
          0.497
JT27_10720
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)
   
          0.447
JT27_08380
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division (302 aa)
   
          0.427
JT27_07745
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (778 aa)
 
          0.418
JT27_14890
Cytochrome; Derived by automated computational analysis using gene prediction method- Protein Homology (122 aa)
   
          0.413
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (172 aa)
   
        0.407
JT27_03080
DNA processing protein DprA; Derived by automated computational analysis using gene prediction method- Protein Homology (375 aa)
   
        0.404
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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