STRINGSTRING
JT27_04665 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_04665" - Lysine methyltransferase in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_04665Lysine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (266 aa)    
Predicted Functional Partners:
JT27_04660
Acetolactate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (589 aa)
   
        0.620
JT27_17290
Deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (307 aa)
   
 
  0.497
JT27_00830
Acetoin utilization protein; Derived by automated computational analysis using gene prediction method- Protein Homology (369 aa)
   
 
  0.497
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1420 aa)
     
 
  0.492
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (473 aa)
     
 
  0.475
JT27_16730
DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (115 aa)
   
          0.473
JT27_05325
Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] (369 aa)
   
 
  0.451
JT27_13120
Helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (664 aa)
     
 
  0.450
JT27_01320
Helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (1101 aa)
     
 
  0.450
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (327 aa)
     
 
  0.436
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (9%) [HD]