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JT27_04915 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_04915" - Signal peptide protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_04915Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (295 aa)    
Predicted Functional Partners:
JT27_04910
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
 
          0.874
JT27_04905
Alanine-phosphoribitol ligase; Derived by automated computational analysis using gene prediction method- Protein Homology (414 aa)
 
          0.808
JT27_04895
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (530 aa)
 
          0.693
JT27_04900
Flavin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (203 aa)
 
        0.647
JT27_00300
Phenol hydroxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (120 aa)
 
          0.645
JT27_00305
Phenol 2-monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (501 aa)
 
     
  0.644
JT27_00315
Phenol hydroxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (335 aa)
 
          0.634
JT27_00310
Monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (90 aa)
 
          0.629
JT27_00320
Phenol hydroxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (90 aa)
 
     
  0.617
JT27_04290
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (287 aa)
   
          0.572
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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