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JT27_05400 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_05400" - ABC transporter permease in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_05400ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (377 aa)    
Predicted Functional Partners:
JT27_05395
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
 
 
  0.962
JT27_05390
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (301 aa)
 
 
  0.957
JT27_05385
Phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)
 
          0.948
JT27_05405
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (458 aa)
 
 
  0.932
JT27_05370
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (130 aa)
 
   
  0.924
JT27_05375
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (119 aa)
 
   
  0.923
JT27_05380
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (288 aa)
 
          0.910
JT27_05365
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
 
          0.781
JT27_05355
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (459 aa)
 
        0.778
JT27_05360
ATP synthase subunit alpha; Derived by automated computational analysis using gene prediction method- Protein Homology (353 aa)
   
          0.778
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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