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JT27_05515 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_05515" - Integrase in Alcaligenes faecalis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_05515Integrase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ’phage’ integrase family (396 aa)    
Predicted Functional Partners:
JT27_01365
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (71 aa)
 
     
  0.689
JT27_05520
Regulatory protein MarR; Derived by automated computational analysis using gene prediction method- Protein Homology (105 aa)
 
          0.620
JT27_05565
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (400 aa)
   
        0.583
JT27_05525
Restriction endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (330 aa)
 
          0.524
mnmE
tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. TrmE GTPase family (457 aa)
         
  0.509
JT27_13170
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (577 aa)
 
   
  0.504
JT27_13085
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (232 aa)
   
        0.474
JT27_14990
Integrase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ’phage’ integrase family (356 aa)
   
     
  0.447
JT27_12070
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (77 aa)
   
        0.442
JT27_13175
Cobyrinic acid a,c-diamide synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
 
   
  0.432
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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