STRINGSTRING
JT27_05530 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_05530" - Restriction endonuclease HindVIIP subunit M in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_05530Restriction endonuclease HindVIIP subunit M; Derived by automated computational analysis using gene prediction method- Protein Homology (571 aa)    
Predicted Functional Partners:
JT27_05545
Type I restriction enzyme R Protein; Subunit R is required for both nuclease and ATPase activities, but not for modification (1049 aa)
   
  0.990
JT27_05550
Toxin Fic; Derived by automated computational analysis using gene prediction method- Protein Homology (344 aa)
 
          0.610
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (528 aa)
         
  0.576
JT27_05525
Restriction endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (330 aa)
 
          0.564
JT27_13030
DNA polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology (572 aa)
 
     
  0.552
JT27_13010
ATP-dependent endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (582 aa)
   
        0.526
JT27_05520
Regulatory protein MarR; Derived by automated computational analysis using gene prediction method- Protein Homology (105 aa)
 
          0.474
JT27_18300
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (577 aa)
 
     
  0.439
JT27_06350
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (462 aa)
 
        0.437
JT27_05565
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (400 aa)
   
        0.435
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (27%) [HD]