STRINGSTRING
JT27_05550 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_05550" - Toxin Fic in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_05550Toxin Fic; Derived by automated computational analysis using gene prediction method- Protein Homology (344 aa)    
Predicted Functional Partners:
JT27_05545
Type I restriction enzyme R Protein; Subunit R is required for both nuclease and ATPase activities, but not for modification (1049 aa)
 
          0.885
JT27_05540
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (406 aa)
              0.778
JT27_05570
Damage-inducible protein D; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)
          0.754
JT27_05530
Restriction endonuclease HindVIIP subunit M; Derived by automated computational analysis using gene prediction method- Protein Homology (571 aa)
 
          0.610
JT27_01345
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (366 aa)
 
          0.577
JT27_06610
Protein kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (415 aa)
 
          0.520
JT27_06350
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (462 aa)
 
          0.501
JT27_13030
DNA polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology (572 aa)
 
          0.489
JT27_01340
DNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (630 aa)
 
          0.406
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (19%) [HD]