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JT27_05600 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_05600" - Isomerase in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_05600Isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (262 aa)    
Predicted Functional Partners:
JT27_17120
Dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (151 aa)
         
  0.596
JT27_18685
8-oxoguanine deaminase; Derived by automated computational analysis using gene prediction method- Protein Homology (458 aa)
     
   
  0.566
JT27_06420
Catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; Derived by automated computational analysis using gene prediction method- Protein Homology (471 aa)
     
   
  0.566
JT27_03455
Hydroxymethylglutaryl-CoA lyase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the alpha-IPM synthase/homocitrate synthase family (301 aa)
   
   
  0.565
JT27_03085
Hydroxymethylglutaryl-CoA lyase; Catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; Derived by automated computational analysis using gene prediction method- Protein Homology (306 aa)
   
   
  0.565
tauA
Taurine ABC transporter substrate-binding protein; With TauB and TauC is responsible for taurine uptake; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)
         
  0.559
JT27_12800
Aldolase; Derived by automated computational analysis using gene prediction method- Protein Homology (257 aa)
         
  0.549
JT27_11995
Aldolase; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
         
  0.549
JT27_11820
Aldolase; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)
         
  0.549
JT27_07310
Aldolase; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
         
  0.549
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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