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JT27_05750 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_05750" - Peptidoglycan-binding protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
JT27_05750Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (364 aa)    
Predicted Functional Partners:
JT27_05755
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)
 
   
  0.934
JT27_05745
Two-component sensor protein; Derived by automated computational analysis using gene prediction method- Protein Homology (630 aa)
 
   
  0.932
JT27_05960
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1342 aa)
         
  0.829
JT27_14770
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (650 aa)
 
          0.687
JT27_11225
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
 
          0.675
JT27_14780
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (563 aa)
   
          0.663
JT27_14865
Lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology (239 aa)
   
          0.657
JT27_14820
Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method- Protein Homology (386 aa)
   
          0.655
JT27_14785
ShlB-type family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (565 aa)
 
     
  0.646
rlpA
Endolytic peptidoglycan transglycosylase RlpA; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides (362 aa)
   
 
  0.631
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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