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JT27_05940 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_05940" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_05940Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (73 aa)    
Predicted Functional Partners:
JT27_05945
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (729 aa)
 
          0.957
JT27_05950
Secretion protein HylD; Derived by automated computational analysis using gene prediction method- Protein Homology (453 aa)
 
          0.952
JT27_05935
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (479 aa)
 
          0.919
JT27_05960
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1342 aa)
 
          0.871
JT27_05965
Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology (210 aa)
 
          0.739
JT27_05970
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (646 aa)
   
     
  0.730
JT27_05955
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (204 aa)
 
          0.658
JT27_19015
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (727 aa)
 
          0.569
JT27_19010
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method- Protein Homology (401 aa)
 
          0.533
JT27_04290
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (287 aa)
   
          0.443
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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