STRINGSTRING
JT27_06265 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_06265" - Ferredoxin in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_06265Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (102 aa)    
Predicted Functional Partners:
JT27_06270
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (114 aa)
              0.880
AFA_17790
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (92 aa)
 
       
0.870
JT27_06280
Ornithine cyclodeaminase; Derived by automated computational analysis using gene prediction method- Protein Homology (314 aa)
 
          0.854
JT27_06230
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (505 aa)
 
          0.826
JT27_06240
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (244 aa)
 
          0.805
JT27_06250
CDP-alcohol phosphatidyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (159 aa)
 
          0.764
JT27_08800
Pyrroloquinoline quinone biosynthesis protein PqqC; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
   
          0.735
JT27_06285
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (116 aa)
 
          0.713
JT27_06225
Probable membrane transporter protein; Derived by automated computational analysis using gene prediction method- Protein Homology (244 aa)
 
          0.665
JT27_17455
Cytochrome oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (57 aa)
   
          0.621
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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