STRINGSTRING
AFA_17790 protein (Alcaligenes faecalis) - STRING interaction network
"AFA_17790" - Ferredoxin in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFA_17790Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (92 aa)    
Predicted Functional Partners:
JT27_06270
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (114 aa)
              0.890
JT27_06265
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (102 aa)
 
       
0.870
JT27_06280
Ornithine cyclodeaminase; Derived by automated computational analysis using gene prediction method- Protein Homology (314 aa)
 
          0.851
JT27_06240
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (244 aa)
 
          0.746
JT27_06285
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (116 aa)
              0.685
JT27_06230
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (505 aa)
 
          0.659
JT27_06250
CDP-alcohol phosphatidyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (159 aa)
 
          0.589
JT27_08800
Pyrroloquinoline quinone biosynthesis protein PqqC; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
   
          0.572
JT27_06260
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (63 aa)
              0.515
JT27_06225
Probable membrane transporter protein; Derived by automated computational analysis using gene prediction method- Protein Homology (244 aa)
 
          0.509
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (8%) [HD]